Index

A

adapt_probabilities() (pygenalgo.engines.generic_ga.GenericGA method) all_counters (pygenalgo.operators.crossover.meta_crossover.MetaCrossover property) (pygenalgo.operators.migration.meta_migration.MetaMigration property) (pygenalgo.operators.mutation.meta_mutator.MetaMutator property) (pygenalgo.operators.selection.meta_selector.MetaSelector property)

apply_corrections() (in module pygenalgo.utils.auxiliary) average_hamming_distance() (in module pygenalgo.utils.auxiliary)

B

best_chromosome() (pygenalgo.engines.generic_ga.GenericGA method) best_n() (pygenalgo.engines.generic_ga.GenericGA method)

BlendCrossover (class in pygenalgo.operators.crossover.blend_crossover) BoltzmannSelector (class in pygenalgo.operators.selection.boltzmann_selector)

C

Chromosome (class in pygenalgo.genome.chromosome) clamp() (in module pygenalgo.utils.utilities) clear_all() (pygenalgo.engines.generic_ga.GenericGA method) ClockwiseMigration (class in pygenalgo.operators.migration.clockwise_migration) clone() (pygenalgo.genome.chromosome.Chromosome method) (pygenalgo.genome.gene.Gene method) cost_function() (in module pygenalgo.utils.utilities) counter (pygenalgo.operators.genetic_operator.GeneticOperator property) crossover() (pygenalgo.operators.crossover.blend_crossover.BlendCrossover method) (pygenalgo.operators.crossover.crossover_operator.CrossoverOperator method) (pygenalgo.operators.crossover.meta_crossover.MetaCrossover method) (pygenalgo.operators.crossover.multi_point_crossover.MultiPointCrossover method) (pygenalgo.operators.crossover.order_crossover.OrderCrossover method) (pygenalgo.operators.crossover.partially_mapped_crossover.PartiallyMappedCrossover method) (pygenalgo.operators.crossover.position_based_crossover.PositionBasedCrossover method) (pygenalgo.operators.crossover.single_point_crossover.SinglePointCrossover method) (pygenalgo.operators.crossover.uniform_crossover.UniformCrossover method)

crossover_mutate() (pygenalgo.engines.generic_ga.GenericGA method) CrossoverOperator (class in pygenalgo.operators.crossover.crossover_operator) crossx_op (pygenalgo.engines.generic_ga.GenericGA property)

E

ensure_positive_fitness() (in module pygenalgo.operators.selection.select_operator)

evaluate_fitness() (pygenalgo.engines.generic_ga.GenericGA method)

F

f_eval_increase_by() (pygenalgo.engines.generic_ga.GenericGA method) f_evals (pygenalgo.engines.generic_ga.GenericGA property) fitness (pygenalgo.genome.chromosome.Chromosome property) fitness_func (pygenalgo.engines.generic_ga.GenericGA attribute) (pygenalgo.engines.standard_ga.StandardGA attribute)

flip() (pygenalgo.genome.gene.Gene method) FlipMutator (class in pygenalgo.operators.mutation.flip_mutator) func (pygenalgo.genome.gene.Gene property)

G

GaussianMutator (class in pygenalgo.operators.mutation.gaussian_mutator) Gene (class in pygenalgo.genome.gene)

GenericGA (class in pygenalgo.engines.generic_ga) GeneticOperator (class in pygenalgo.operators.genetic_operator) genome (pygenalgo.genome.chromosome.Chromosome property)

H

hamming_distance() (pygenalgo.genome.chromosome.Chromosome method)

has_valid_genome() (pygenalgo.genome.chromosome.Chromosome method)

I

id (pygenalgo.utils.auxiliary.SubPopulation property) inc_counter() (pygenalgo.operators.genetic_operator.GeneticOperator method) increase_counter() (in module pygenalgo.operators.genetic_operator) individual_fitness() (pygenalgo.engines.generic_ga.GenericGA method) invalidate_fitness() (pygenalgo.genome.chromosome.Chromosome method) InverseMutator (class in pygenalgo.operators.mutation.inverse_mutator)

is_operator_applicable() (pygenalgo.operators.genetic_operator.GeneticOperator method) is_valid (pygenalgo.genome.gene.Gene property) IslandModelGA (class in pygenalgo.engines.island_model_ga) items (pygenalgo.operators.genetic_operator.GeneticOperator property) iteration (pygenalgo.engines.generic_ga.GenericGA property) (pygenalgo.operators.genetic_operator.GeneticOperator property)

L

LinearRankSelector (class in pygenalgo.operators.selection.linear_rank_selector)

M

MAX_CPUs (pygenalgo.engines.generic_ga.GenericGA attribute) MetaCrossover (class in pygenalgo.operators.crossover.meta_crossover) MetaMigration (class in pygenalgo.operators.migration.meta_migration) MetaMutator (class in pygenalgo.operators.mutation.meta_mutator) MetaSelector (class in pygenalgo.operators.selection.meta_selector) migrate() (pygenalgo.operators.migration.clockwise_migration.ClockwiseMigration method) (pygenalgo.operators.migration.meta_migration.MetaMigration method) (pygenalgo.operators.migration.migration_operator.MigrationOperator method) (pygenalgo.operators.migration.random_migration.RandomMigration method) migrate_op (pygenalgo.engines.island_model_ga.IslandModelGA property) MigrationOperator (class in pygenalgo.operators.migration.migration_operator) module pygenalgo pygenalgo.engines pygenalgo.engines.generic_ga pygenalgo.engines.island_model_ga pygenalgo.engines.standard_ga pygenalgo.genome pygenalgo.genome.chromosome pygenalgo.genome.gene pygenalgo.operators pygenalgo.operators.crossover pygenalgo.operators.crossover.blend_crossover pygenalgo.operators.crossover.crossover_operator pygenalgo.operators.crossover.meta_crossover pygenalgo.operators.crossover.multi_point_crossover pygenalgo.operators.crossover.order_crossover pygenalgo.operators.crossover.partially_mapped_crossover pygenalgo.operators.crossover.position_based_crossover pygenalgo.operators.crossover.single_point_crossover pygenalgo.operators.crossover.uniform_crossover pygenalgo.operators.genetic_operator pygenalgo.operators.migration pygenalgo.operators.migration.clockwise_migration pygenalgo.operators.migration.meta_migration pygenalgo.operators.migration.migration_operator pygenalgo.operators.migration.random_migration pygenalgo.operators.mutation pygenalgo.operators.mutation.flip_mutator pygenalgo.operators.mutation.gaussian_mutator pygenalgo.operators.mutation.inverse_mutator pygenalgo.operators.mutation.meta_mutator pygenalgo.operators.mutation.mutate_operator pygenalgo.operators.mutation.polynomial_mutator pygenalgo.operators.mutation.random_mutator pygenalgo.operators.mutation.shuffle_mutator pygenalgo.operators.mutation.swap_mutator pygenalgo.operators.selection pygenalgo.operators.selection.boltzmann_selector pygenalgo.operators.selection.linear_rank_selector pygenalgo.operators.selection.meta_selector pygenalgo.operators.selection.neighborhood_selector pygenalgo.operators.selection.random_selector pygenalgo.operators.selection.roulette_wheel_selector pygenalgo.operators.selection.select_operator pygenalgo.operators.selection.stochastic_universal_selector pygenalgo.operators.selection.tournament_selector pygenalgo.operators.selection.truncation_selector pygenalgo.utils pygenalgo.utils.auxiliary pygenalgo.utils.utilities

MultiPointCrossover (class in pygenalgo.operators.crossover.multi_point_crossover) mutate() (pygenalgo.operators.mutation.flip_mutator.FlipMutator method) (pygenalgo.operators.mutation.gaussian_mutator.GaussianMutator method) (pygenalgo.operators.mutation.inverse_mutator.InverseMutator method) (pygenalgo.operators.mutation.meta_mutator.MetaMutator method) (pygenalgo.operators.mutation.mutate_operator.MutationOperator method) (pygenalgo.operators.mutation.polynomial_mutator.PolynomialMutator method) (pygenalgo.operators.mutation.random_mutator.RandomMutator method) (pygenalgo.operators.mutation.shuffle_mutator.ShuffleMutator method) (pygenalgo.operators.mutation.swap_mutator.SwapMutator method) mutate_op (pygenalgo.engines.generic_ga.GenericGA property) MutationOperator (class in pygenalgo.operators.mutation.mutate_operator)

N

n_cpus (pygenalgo.engines.generic_ga.GenericGA property) NeighborhoodSelector (class in pygenalgo.operators.selection.neighborhood_selector)

np_cdist() (in module pygenalgo.utils.utilities) np_pareto_front() (in module pygenalgo.utils.utilities) num_islands (pygenalgo.engines.island_model_ga.IslandModelGA property)

O

OrderCrossover (class in pygenalgo.operators.crossover.order_crossover)

P

pareto_dominance() (in module pygenalgo.utils.utilities) pareto_front() (in module pygenalgo.utils.utilities) PartiallyMappedCrossover (class in pygenalgo.operators.crossover.partially_mapped_crossover) PolynomialMutator (class in pygenalgo.operators.mutation.polynomial_mutator) pop_id (pygenalgo.utils.auxiliary.SubPopulation attribute) population (pygenalgo.engines.generic_ga.GenericGA attribute) (pygenalgo.engines.standard_ga.StandardGA attribute) (pygenalgo.utils.auxiliary.SubPopulation attribute) population_fitness() (pygenalgo.engines.generic_ga.GenericGA method) PositionBasedCrossover (class in pygenalgo.operators.crossover.position_based_crossover) print_migration_stats() (pygenalgo.engines.island_model_ga.IslandModelGA method) print_operator_stats() (pygenalgo.engines.standard_ga.StandardGA method) probabilities() (pygenalgo.operators.selection.linear_rank_selector.LinearRankSelector static method) probability (pygenalgo.operators.genetic_operator.GeneticOperator property) pygenalgo module pygenalgo.engines module pygenalgo.engines.generic_ga module pygenalgo.engines.island_model_ga module pygenalgo.engines.standard_ga module pygenalgo.genome module pygenalgo.genome.chromosome module pygenalgo.genome.gene module pygenalgo.operators module pygenalgo.operators.crossover module pygenalgo.operators.crossover.blend_crossover module pygenalgo.operators.crossover.crossover_operator module pygenalgo.operators.crossover.meta_crossover module pygenalgo.operators.crossover.multi_point_crossover module pygenalgo.operators.crossover.order_crossover module pygenalgo.operators.crossover.partially_mapped_crossover module pygenalgo.operators.crossover.position_based_crossover module pygenalgo.operators.crossover.single_point_crossover module pygenalgo.operators.crossover.uniform_crossover module pygenalgo.operators.genetic_operator module pygenalgo.operators.migration module

pygenalgo.operators.migration.clockwise_migration module pygenalgo.operators.migration.meta_migration module pygenalgo.operators.migration.migration_operator module pygenalgo.operators.migration.random_migration module pygenalgo.operators.mutation module pygenalgo.operators.mutation.flip_mutator module pygenalgo.operators.mutation.gaussian_mutator module pygenalgo.operators.mutation.inverse_mutator module pygenalgo.operators.mutation.meta_mutator module pygenalgo.operators.mutation.mutate_operator module pygenalgo.operators.mutation.polynomial_mutator module pygenalgo.operators.mutation.random_mutator module pygenalgo.operators.mutation.shuffle_mutator module pygenalgo.operators.mutation.swap_mutator module pygenalgo.operators.selection module pygenalgo.operators.selection.boltzmann_selector module pygenalgo.operators.selection.linear_rank_selector module pygenalgo.operators.selection.meta_selector module pygenalgo.operators.selection.neighborhood_selector module pygenalgo.operators.selection.random_selector module pygenalgo.operators.selection.roulette_wheel_selector module pygenalgo.operators.selection.select_operator module pygenalgo.operators.selection.stochastic_universal_selector module pygenalgo.operators.selection.tournament_selector module pygenalgo.operators.selection.truncation_selector module pygenalgo.utils module pygenalgo.utils.auxiliary module pygenalgo.utils.utilities module

R

random() (pygenalgo.genome.gene.Gene method) RandomMigration (class in pygenalgo.operators.migration.random_migration) RandomMutator (class in pygenalgo.operators.mutation.random_mutator) RandomSelector (class in pygenalgo.operators.selection.random_selector) reset_counter() (pygenalgo.operators.crossover.meta_crossover.MetaCrossover method) (pygenalgo.operators.genetic_operator.GeneticOperator method) (pygenalgo.operators.migration.meta_migration.MetaMigration method) (pygenalgo.operators.mutation.meta_mutator.MetaMutator method) (pygenalgo.operators.selection.meta_selector.MetaSelector method)

rng (pygenalgo.engines.generic_ga.GenericGA property) (pygenalgo.operators.genetic_operator.GeneticOperator property) rng_GA (pygenalgo.engines.generic_ga.GenericGA attribute) RouletteWheelSelector (class in pygenalgo.operators.selection.roulette_wheel_selector) run() (pygenalgo.engines.generic_ga.GenericGA method) (pygenalgo.engines.island_model_ga.IslandModelGA method) (pygenalgo.engines.standard_ga.StandardGA method)

S

select() (pygenalgo.operators.selection.boltzmann_selector.BoltzmannSelector method) (pygenalgo.operators.selection.linear_rank_selector.LinearRankSelector method) (pygenalgo.operators.selection.meta_selector.MetaSelector method) (pygenalgo.operators.selection.neighborhood_selector.NeighborhoodSelector method) (pygenalgo.operators.selection.random_selector.RandomSelector method) (pygenalgo.operators.selection.roulette_wheel_selector.RouletteWheelSelector method) (pygenalgo.operators.selection.select_operator.SelectionOperator method) (pygenalgo.operators.selection.stochastic_universal_selector.StochasticUniversalSelector method) (pygenalgo.operators.selection.tournament_selector.TournamentSelector method) (pygenalgo.operators.selection.truncation_selector.TruncationSelector method) select_op (pygenalgo.engines.generic_ga.GenericGA property)

SelectionOperator (class in pygenalgo.operators.selection.select_operator) set_iteration() (pygenalgo.operators.genetic_operator.GeneticOperator class method) set_seed() (pygenalgo.engines.generic_ga.GenericGA class method) (pygenalgo.operators.genetic_operator.GeneticOperator class method) ShuffleMutator (class in pygenalgo.operators.mutation.shuffle_mutator) SinglePointCrossover (class in pygenalgo.operators.crossover.single_point_crossover) StandardGA (class in pygenalgo.engines.standard_ga) stats (pygenalgo.engines.generic_ga.GenericGA property) StochasticUniversalSelector (class in pygenalgo.operators.selection.stochastic_universal_selector) SubPopulation (class in pygenalgo.utils.auxiliary) SwapMutator (class in pygenalgo.operators.mutation.swap_mutator)

T

TournamentSelector (class in pygenalgo.operators.selection.tournament_selector)

TruncationSelector (class in pygenalgo.operators.selection.truncation_selector)

U

UniformCrossover (class in pygenalgo.operators.crossover.uniform_crossover)

unique_pairs() (in module pygenalgo.utils.auxiliary) update_stats() (pygenalgo.engines.standard_ga.StandardGA method)

V

valid (pygenalgo.genome.chromosome.Chromosome property)

value (pygenalgo.genome.gene.Gene property) values() (pygenalgo.genome.chromosome.Chromosome method)